A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15973556



Internal ID20045496
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:150617848..150698848hg38UCSC Ensembl
chr4:151539000..151620000hg19UCSC Ensembl
Cytoband4q31.3
Allele length
AssemblyAllele length
hg3881001
hg1981001
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4110542
Supporting Variants
Samples
Known GenesLRBA
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15973556
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000093


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer