A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15971299



Internal ID20043239
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:97771601..97780407hg38UCSC Ensembl
chr3:97490445..97499251hg19UCSC Ensembl
Cytoband3q11.2
Allele length
AssemblyAllele length
hg388807
hg198807
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4078790
Supporting Variants
Samples
Known GenesARL6
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15971299
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000138


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