A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15970455



Internal ID20042395
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:148229182..148238563hg38UCSC Ensembl
chr2:148986751..148996132hg19UCSC Ensembl
Cytoband2q23.1
Allele length
AssemblyAllele length
hg389382
hg199382
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4087614
Supporting Variants
Samples
Known GenesMBD5
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15970455
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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