A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15969967



Internal ID19695221
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:210069319..210266857hg38UCSC Ensembl
chr2:210934043..211131581hg19UCSC Ensembl
Cytoband2q34
Allele length
AssemblyAllele length
hg38197539
hg19197539
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4083627
Supporting Variants
Samples
Known GenesACADL, KANSL1L
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15969967
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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