A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15969284



Internal ID19694538
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:170828123..170828950hg38UCSC Ensembl
chr2:171684633..171685460hg19UCSC Ensembl
Cytoband2q31.1
Allele length
AssemblyAllele length
hg38828
hg19828
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4075653
Supporting Variants
Samples
Known GenesGAD1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15969284
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.002216


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