A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15967857



Internal ID19693111
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:29839094..30061108hg38UCSC Ensembl
chr2:30061960..30283974hg19UCSC Ensembl
Cytoband2p23.1
Allele length
AssemblyAllele length
hg38222015
hg19222015
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4071733
Supporting Variants
Samples
Known GenesALK
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15967857
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000138


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