A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15965537



Internal ID19690796
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr20:36619933..36669345hg38UCSC Ensembl
chr20:35248336..35297748hg19UCSC Ensembl
Cytoband20q11.23
Allele length
AssemblyAllele length
hg3849413
hg1949413
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4284864
Supporting Variants
Samples
Known GenesNDRG3, SLA2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15965537
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000092


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