A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15965397



Internal ID19690657
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:9968069..9998450hg38UCSC Ensembl
chr1:10028127..10058508hg19UCSC Ensembl
Cytoband1p36.22
Allele length
AssemblyAllele length
hg3830382
hg1930382
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4035880
Supporting Variants
Samples
Known GenesNMNAT1, RBP7
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15965397
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000049


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer