A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15962157



Internal ID20034097
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr19:4295208..4300248hg38UCSC Ensembl
chr19:4295205..4300245hg19UCSC Ensembl
Cytoband19p13.3
Allele length
AssemblyAllele length
hg385041
hg195041
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4267004
Supporting Variants
Samples
Known GenesTMIGD2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15962157
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000738


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