A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15961360



Internal ID19686614
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:108097377..108252978hg38UCSC Ensembl
chr1:108639999..108795600hg19UCSC Ensembl
Cytoband1p13.3
Allele length
AssemblyAllele length
hg38155602
hg19155602
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4517554
Supporting Variants
Samples
Known GenesNBPF4, SLC25A24
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15961360
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.00023


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