A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15960711



Internal ID20032651
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr18:50589477..50636939hg38UCSC Ensembl
chr18:48115847..48163309hg19UCSC Ensembl
Cytoband18q21.1
Allele length
AssemblyAllele length
hg3847463
hg1947463
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4264128
Supporting Variants
Samples
Known GenesMAPK4
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15960711
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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