A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15960150



Internal ID19685404
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr19:251999..330500hg38UCSC Ensembl
chr19:251999..330500hg19UCSC Ensembl
Cytoband19p13.3
Allele length
AssemblyAllele length
hg3878502
hg1978502
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4531408
Supporting Variants
Samples
Known GenesMIER2, PPAP2C
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15960150
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000138


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer