A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15959503



Internal ID20031443
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr18:42561808..42577974hg38UCSC Ensembl
chr18:40141773..40157939hg19UCSC Ensembl
Cytoband18q12.3
Allele length
AssemblyAllele length
hg3816167
hg1916167
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4263183
Supporting Variants
Samples
Known GenesLINC00907
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15959503
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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