A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15959226



Internal ID19684480
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:7011381..7018681hg38UCSC Ensembl
chr17:6914700..6922000hg19UCSC Ensembl
Cytoband17p13.1
Allele length
AssemblyAllele length
hg387301
hg197301
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4241950
Supporting Variants
Samples
Known GenesC17orf49, LOC100506713, MIR195, MIR497, MIR497HG, RNASEK, RNASEK-C17orf49
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15959226
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.004078


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