A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15959224



Internal ID20031164
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:7005556..7005977hg38UCSC Ensembl
chr17:6908875..6909296hg19UCSC Ensembl
Cytoband17p13.1
Allele length
AssemblyAllele length
hg38422
hg19422
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4241122
Supporting Variants
Samples
Known GenesALOX12, LOC100506713
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15959224
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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