A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15959038



Internal ID20030978
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr18:4403272..4931394hg38UCSC Ensembl
chr18:4403272..4931393hg19UCSC Ensembl
Cytoband18p11.31
Allele length
AssemblyAllele length
hg38528123
hg19528122
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4270848
Supporting Variants
Samples
Known GenesDLGAP1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15959038
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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