A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15958115



Internal ID20030055
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:18647686..18689787hg38UCSC Ensembl
chr17:18550999..18593100hg19UCSC Ensembl
Cytoband17p11.2
Allele length
AssemblyAllele length
hg3842102
hg1942102
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4531241
Supporting Variants
Samples
Known GenesFOXO3B, ZNF286B
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15958115
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000323


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