A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15957082



Internal ID20029022
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:85213768..85599769hg38UCSC Ensembl
chr15:85756999..86143000hg19UCSC Ensembl
Cytoband15q25.3
Allele length
AssemblyAllele length
hg38386002
hg19386002
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4531528
Supporting Variants
Samples
Known GenesAKAP13
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15957082
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000323


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