A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15957



Internal ID15495028
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:31391823..31392654hg38UCSC Ensembl
Outerchr6:31391148..31394722hg38UCSC Ensembl
Innerchr6:31359600..31360431hg19UCSC Ensembl
Outerchr6:31358925..31362499hg19UCSC Ensembl
Innerchr6:31467579..31468410hg18UCSC Ensembl
Outerchr6:31466904..31470478hg18UCSC Ensembl
Innerchr6:31467579..31468410hg17UCSC Ensembl
Outerchr6:31466904..31470478hg17UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg383575
hg193575
hg183575
hg173575
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10820
Supporting Variants
SamplesNA19132
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv15957
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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