A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15956896



Internal ID20028836
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr14:72805781..72982682hg38UCSC Ensembl
chr14:73272489..73449390hg19UCSC Ensembl
Cytoband14q24.2
Allele length
AssemblyAllele length
hg38176902
hg19176902
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4217423
Supporting Variants
Samples
Known GenesDCAF4, DPF3, ZFYVE1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15956896
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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