A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15955260



Internal ID20027200
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr13:77705116..77705768hg38UCSC Ensembl
chr13:78279251..78279903hg19UCSC Ensembl
Cytoband13q22.3
Allele length
AssemblyAllele length
hg38653
hg19653
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4220417
Supporting Variants
Samples
Known GenesSLAIN1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15955260
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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