A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15954794



Internal ID20026734
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:12069761..12535235hg38UCSC Ensembl
chr16:12163618..12629092hg19UCSC Ensembl
Cytoband16p13.12
Allele length
AssemblyAllele length
hg38465475
hg19465475
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4247403
Supporting Variants
Samples
Known GenesSNX29
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15954794
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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