A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15954454



Internal ID19679708
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr12:11320727..11452734hg38UCSC Ensembl
chr12:11473661..11605668hg19UCSC Ensembl
Cytoband12p13.2
Allele length
AssemblyAllele length
hg38132008
hg19132008
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4203796
Supporting Variants
Samples
Known GenesPRB1, PRB2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15954454
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.001199


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