A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15954393



Internal ID20026333
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:134478009..134852060hg38UCSC Ensembl
chr11:134347903..134721954hg19UCSC Ensembl
Cytoband11q25
Allele length
AssemblyAllele length
hg38374052
hg19374052
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4204110
Supporting Variants
Samples
Known GenesLOC283177
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15954393
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.002213


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