A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15954166



Internal ID19679420
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:31014529..31069859hg38UCSC Ensembl
chr16:31025850..31081180hg19UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg3855331
hg1955331
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4233599
Supporting Variants
Samples
Known GenesSTX4, ZNF668
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15954166
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer