A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15953309



Internal ID19678563
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:26402467..27373944hg38UCSC Ensembl
chr16:26413788..27385265hg19UCSC Ensembl
Cytoband16p12.1
Allele length
AssemblyAllele length
hg38971478
hg19971478
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4251132
Supporting Variants
Samples
Known GenesC16orf82, FLJ21408, IL4R, KDM8, NSMCE1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15953309
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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