A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15952761



Internal ID19678015
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr14:54538118..54540411hg38UCSC Ensembl
chr14:55004836..55007129hg19UCSC Ensembl
Cytoband14q22.2
Allele length
AssemblyAllele length
hg382294
hg192294
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4229896
Supporting Variants
Samples
Known GenesCGRRF1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15952761
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000184


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