A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15952270



Internal ID20024210
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:4102769..4212770hg38UCSC Ensembl
chr11:4123999..4234000hg19UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg38110002
hg19110002
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4528036
Supporting Variants
Samples
Known GenesLOC100506082, RRM1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15952270
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.00023


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