A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15952161



Internal ID19677415
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:94735243..95081243hg38UCSC Ensembl
chr10:96495000..96841000hg19UCSC Ensembl
Cytoband10q23.33
Allele length
AssemblyAllele length
hg38346001
hg19346001
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4188682
Supporting Variants
Samples
Known GenesCYP2C18, CYP2C19, CYP2C8, CYP2C9
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15952161
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000092


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