A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15951215



Internal ID19676469
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr13:41192864..41225864hg38UCSC Ensembl
chr13:41767000..41800000hg19UCSC Ensembl
Cytoband13q14.11
Allele length
AssemblyAllele length
hg3833001
hg1933001
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4213859
Supporting Variants
Samples
Known GenesKBTBD7, MTRF1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15951215
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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