A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15950689



Internal ID20022629
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:38420972..38486572hg38UCSC Ensembl
chr10:38709900..38775500hg19UCSC Ensembl
Cytoband10p11.1
Allele length
AssemblyAllele length
hg3865601
hg1965601
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4190447
Supporting Variants
Samples
Known GenesLINC00999
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15950689
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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