A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15950598



Internal ID19675852
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr12:124775595..124839806hg38UCSC Ensembl
chr12:125260141..125324352hg19UCSC Ensembl
Cytoband12q24.31
Allele length
AssemblyAllele length
hg3864212
hg1964212
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4221424
Supporting Variants
Samples
Known GenesSCARB1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15950598
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000092


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