A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15949666



Internal ID19674920
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:36558529..36578525hg38UCSC Ensembl
chr11:36580079..36600075hg19UCSC Ensembl
Cytoband11p12
Allele length
AssemblyAllele length
hg3819997
hg1919997
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4211020
Supporting Variants
Samples
Known GenesRAG1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15949666
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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