A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15948023



Internal ID20019963
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:66019660..66633929hg38UCSC Ensembl
chr10:67779418..68393687hg19UCSC Ensembl
Cytoband10q21.3
Allele length
AssemblyAllele length
hg38614270
hg19614270
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4174514
Supporting Variants
Samples
Known GenesCTNNA3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15948023
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000138


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