A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15947605



Internal ID20019545
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:132929696..133011923hg38UCSC Ensembl
chr10:134743200..134825427hg19UCSC Ensembl
Cytoband10q26.3
Allele length
AssemblyAllele length
hg3882228
hg1982228
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4210890
Supporting Variants
Samples
Known GenesLOC399829, TTC40
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15947605
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000323


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