A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15947492



Internal ID20019432
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:118685271..118685350hg38UCSC Ensembl
chr10:120444783..120444862hg19UCSC Ensembl
Cytoband10q26.11
Allele length
AssemblyAllele length
hg3880
hg1980
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4528318
Supporting Variants
Samples
Known GenesCACUL1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15947492
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.09055


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer