A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15946110



Internal ID19671365
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:17038000..17164001hg38UCSC Ensembl
chr10:17079999..17206000hg19UCSC Ensembl
Cytoband10p13
Allele length
AssemblyAllele length
hg38126002
hg19126002
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4525645
Supporting Variants
Samples
Known GenesCUBN, TRDMT1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15946110
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000047


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