A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15944184



Internal ID20016124
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:74069165..74074965hg38UCSC Ensembl
chrX:73289000..73294800hg19UCSC Ensembl
CytobandXq13.2
Allele length
AssemblyAllele length
hg385801
hg195801
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4032837
Supporting Variants
Samples
Known GenesFTX, JPX
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15944184
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000049


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer