A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15943



Internal ID15833650
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32514821..32515331hg38UCSC Ensembl
Outerchr6:32513583..32515648hg38UCSC Ensembl
Innerchr6:32482598..32483108hg19UCSC Ensembl
Outerchr6:32481360..32483425hg19UCSC Ensembl
Innerchr6:32590576..32591086hg18UCSC Ensembl
Outerchr6:32589338..32591403hg18UCSC Ensembl
Innerchr6:32590576..32591086hg17UCSC Ensembl
Outerchr6:32589338..32591403hg17UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg382066
hg192066
hg182066
hg172066
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7883
Supporting Variants
SamplesNA18504
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv15943
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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