A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15938013



Internal ID20009953
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:131869597..131877983hg38UCSC Ensembl
chr9:134744984..134753370hg19UCSC Ensembl
Cytoband9q34.13
Allele length
AssemblyAllele length
hg388387
hg198387
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4177496
Supporting Variants
Samples
Known GenesMED27
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15938013
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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