A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15936543



Internal ID19661797
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:76692412..76698876hg38UCSC Ensembl
chr9:79307328..79313792hg19UCSC Ensembl
Cytoband9q21.2
Allele length
AssemblyAllele length
hg386465
hg196465
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4184517
Supporting Variants
Samples
Known GenesPRUNE2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15936543
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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