A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15934865



Internal ID20006805
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:65733045..65739045hg38UCSC Ensembl
chr9:70427000..70433000hg19UCSC Ensembl
Cytoband9q21.11
Allele length
AssemblyAllele length
hg386001
hg196001
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4184777
Supporting Variants
Samples
Known GenesCBWD3, CBWD5, FOXD4L2, FOXD4L4
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15934865
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.013482


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