A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15931188



Internal ID19656442
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:40061634..40174738hg38UCSC Ensembl
chr8:39919153..40032257hg19UCSC Ensembl
Cytoband8p11.21
Allele length
AssemblyAllele length
hg38113105
hg19113105
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4154861
Supporting Variants
Samples
Known GenesC8orf4
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15931188
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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