A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15930869



Internal ID19656123
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:132126338..132128365hg38UCSC Ensembl
chr8:133138585..133140612hg19UCSC Ensembl
Cytoband8q24.22
Allele length
AssemblyAllele length
hg382028
hg192028
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4166923
Supporting Variants
Samples
Known GenesKCNQ3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15930869
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer