A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15924636



Internal ID19649890
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:141550861..141551937hg38UCSC Ensembl
chr7:141250661..141251737hg19UCSC Ensembl
Cytoband7q34
Allele length
AssemblyAllele length
hg381077
hg191077
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4159734
Supporting Variants
Samples
Known GenesAGK
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15924636
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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