A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15923249



Internal ID19995189
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:103086223..103099645hg38UCSC Ensembl
chr7:102726670..102740092hg19UCSC Ensembl
Cytoband7q22.1
Allele length
AssemblyAllele length
hg3813423
hg1913423
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4160090
Supporting Variants
Samples
Known GenesARMC10, NAPEPLD
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15923249
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000092


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