A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15921995



Internal ID19993935
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:112188570..112205703hg38UCSC Ensembl
chr7:111828625..111845758hg19UCSC Ensembl
Cytoband7q31.1
Allele length
AssemblyAllele length
hg3817134
hg1917134
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4158784
Supporting Variants
Samples
Known GenesDOCK4
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15921995
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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