A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15917616



Internal ID19989556
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:11670999..11824163hg38UCSC Ensembl
chr7:11710626..11863789hg19UCSC Ensembl
Cytoband7p21.3
Allele length
AssemblyAllele length
hg38153165
hg19153164
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4145257
Supporting Variants
Samples
Known GenesTHSD7A
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15917616
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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