A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15917611



Internal ID19989551
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:11570916..11582916hg38UCSC Ensembl
chr7:11610543..11622543hg19UCSC Ensembl
Cytoband7p21.3
Allele length
AssemblyAllele length
hg3812001
hg1912001
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4135629
Supporting Variants
Samples
Known GenesTHSD7A
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15917611
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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