A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15915102



Internal ID19640356
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:151458863..151505656hg38UCSC Ensembl
chr6:151779998..151826791hg19UCSC Ensembl
Cytoband6q25.1
Allele length
AssemblyAllele length
hg3846794
hg1946794
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4134567
Supporting Variants
Samples
Known GenesC6orf211, CCDC170
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15915102
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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